MMDS | 7 Day course in Molecular Modeling Dynamics & Simulations

Sep 16, 2018 09:00 PM - Sep 22, 2018 11:00 PM

Overview

BioDiscovery Group, India is the first to launch online training worldwide and doing it since 2010. Till date we have successfully trained plentiful participants who were not only students but scientists, faculty, professor, company executives, etc from several countries. 

This 7 day course entitled Practical approach in Molecular Modeling Dynamics & Simulations | Insights of Computational Biophysics will highlight this powerful computational technique and provide hands on practical experience on this technique. After lecture and discussions, participants will learn how to model a biological molecule such as a particular protein, solvate the protein, run minimization, equilibration and protein simulation and analyze the simulations.

You will learn in a better way as you will perform the tasks on your own computer systems. The program is designed to learn this latest technology in a better way from your home in a nominal fee.

Online sessions will be conducted everyday from 9-11 PM IST (India Standard Time- UTC +5:30) & GMT+2. So participants can register and opt for any one timings out of two.

TOPICS

  • Introduction to DNA, RNA & Protein
  • Different Structures of Proteins
  • Introduction to Different DATABASES
  • Homology Modelling
  • Making a protein structure file.
  • Solvating the protein in a water box- parameter generation for the protein or the small molecule
  • Adding ions to the solvated protein.
  • NAMD configuration file.
  • Minimization and equilibration.
  • Simulations parameters and running the simulations.
  • Analysis of the simulations.

PRACTICAL APPLICATION

  • Introduction to Different DATABASES
  • Homology Modelling of proteins using Modeller.
  • Making a protein structure file with the help of VMD
  • Solvating the protein in a water box- parameter generation for the protein or the small molecule using the software VMD
  • Adding ions to the solvated protein using VMD
  • Minimization and equilibration using NAMD with the help of VMD
  • Simulations parameters and running the simulations in VMD using NAMD Graphical Interphase.
  • Analysis of the simulations.

TARGET AUDIENCE

The course is best suited for Bachelor, Masters, PhD, students as well as Faculty and Professors from Microbiology, BioChemistry, Biotechnology, Pharmacy, Pharmaceutical Chemistry, Biomedical Technology, Genetics, Bioinformatics, Plant Science and Life Sciences. Professionals: From companies and research institutes.

T & C:

  • Training session will be conducted every day from 9-11 PM IST (India Standard Time- UTC +5:30) & GMT+2. So participants can register and opt for any one timing out of two. Once you select one timing later it will not be changed.
  • The training sessions will be conducted as CHAT, so that you can save the session for reference and use it later for reference. NO VIDEO AND NO AUDIO.
  • In this eWorkshop you will have a LIVE trainer who will solve queries along with giving training.
  • The category in which you register, you will get certificate of that ONLY. So choose the right category.
  • If you register under wrong category then your registration will be invalid and NO REFUND WILL BE MADE IN THIS CASE. This is your mistake and the company is not responsible for it.
  • Only Windows OS is required.
  • Once you register we will send you Welcome email 2 days prior to the workshop. This email will have all details of files, software as well as MESSENGER ID on which you have to send request.
  • Your request will be accepted 5 minutes prior to the start of the workshop. So do not panic if you have sent the request and it is not accepted. It will be accepted 5 minutes prior to your session.
  • If there is power cut/power loss/any other technical difficulty and you miss some part of session then we will compensate that time in the next session. Example, if you have lost 30 minutes then your next session will be of 2:30 minutes instead of 2:00 hours.
  • If you do not turn up for training session on any day then you will be sent an email about the things which would be covered on that day. Next day the next thing will be covered.
  • If you have any urgent work then you can shift that and make sure to be online at your time.
  • The training certificate will be given on successful completion of the tasks.
  • The certificates of all our Online programs are sent by email which has a unique barcode and signature along with company seal. You can take print of that on heavy cardstock or photo paper and get it laminated.
  • No refund will be made in any case.

MMDS | 7 Day course in Molecular Modeling Dynamics & Simulations

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